Our lab applied data mining technology to interpret the information buried within big unstructured data.
Biomedical Text Mining
Extract knowledge nuggets from texts and literature of the biomedical and molecular biology domain.
Clinical Natural Language Processing
Extract and structure clinically-relevant outcomes from clinical texts to aid decision support.
Social Media Mining
Extract, analyze and visualize patterns and trends from social media data.
Here illustrates our active projects. Click here to view the list of our grants, funding and projects.
Here list the recent released softwares developed by our lab. Click here to view the full list of our tools.
MicroRNA Identification (MRI): A RESTful web service for identifying miRNAs from literature and a corpus for miRNA identification.
A BioC module for identifying organism terms in figure captions
A C# library for processing discharge summaries.
A literature-based candidate gene database for hypertension, obesity and diabetes.
A web browser extension to enhance PubMed search with text mining features.
A web-based PubMed-like search application power with semantic analysis
Here list our most recent publications. Click here to view the full list of our publications.
Assessing the severity of positive valence symptoms in initial psychiatric evaluation records: Should we use convolutional neural networks? PLOS ONE (SCI)
SPRENO: a BioC module for identifying organism terms in figure captions Database: The Journal of Biological Databases and Curation (SCI)
Biomarker identification of hepatocellular carcinoma using a methodical literature mining strategy Database: The Journal of Biological Databases and Curation (SCI)
Exploring Associations of Clinical and Social Parameters with Violent Behaviors among Psychiatric Patients (SCI)
NTTMUNSW BioC modules for recognizing and normalizing species and gene/protein mentions Database: The Journal of Biological Databases and Curation (SCI)
MET network in PubMed: a text-mined network visualization and curation system Database: The Journal of Biological Databases and Curation (SCI)
Feature Engineering for Recognizing Adverse Drug Reactions from Twitter Posts Information (EI)
A Context-Aware Approach for Progression Tracking of Medical Concepts in Electronic Medical Records Journal of Biomedical Informatics (SCI)
Text Mining for Translational Bioinformatics BioMed Research International (SCI)
Recognition and Evaluation of Clinical Section Headings in Clinical Documents Using Token-Based Formulation with Conditional Random Fields BioMed Research International (SCI)
Our Amazing Team
Lab Director, Associate Professor of Department of Electrical Engineering of National Kaohsiung University of Science and Technology, Kaohsiung, Taiwan, R.O.C.
Research Fellow of School of Public Health and Community Medicine, University of New South Wales, Sydney, Australia
Associate Researcher of Big Data laboratories of Chunghwa Telecom Laboratories, Taoyuan, Taiwan, R.O.C.
Research Assistant of Intelligent Agent Systems Lab of Institute of Information Science of Academia Sinica, PhD Student of Bioinformatics of Graduate Institute of Biomedical Electronics and Bioinformatics of National Taiwan University, Taipei, Taiwan, R.O.C.
PhD Student of Bioinformatics of Institute of Information Science of Taiwan International Graduate Program of Academia Sinica, Taipei, Taiwan, R.O.C.
Assistant Professor of Graduate Institute of Data Science/Bachelor Program in Data Science and Management of Taipei Medical University, Taipei, Taiwan, R.O.C.
Master Student of Graduate Institute of Biomedical Informatics of Taipei Medical University, Taipei, Taiwan, R.O.C.
Senior Student of Department of Computer Science and Information Engineering of National Taitung University, Taitung, Taiwan, R.O.C.
Research Assistant of National Taiwan University Hospital of Department of Psychiatry, Taipei, Taiwan, R.O.C.
We cooperate with the Institute of Information Science, Academia Sinica, Graduate Institute of Biomedical Informatics, Taipei Medical University, National Health Research Institutes, Kaohsiung Medical University and School of Public Health and Community Medicine, University of New South Wales.